Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_00592 | Not Available | Positive | 634992 - 635204 | 7679.13 |
| hypothetical protein | HMPREF1862_00593 | Not Available | Positive | 635290 - 635853 | 21288.9 |
| hypothetical protein | HMPREF1862_00594 | Not Available | Positive | 635923 - 636375 | 17237.7 |
| hypothetical protein | HMPREF1862_00595 | Not Available | Positive | 636398 - 637009 | 22758.3 |
| hypothetical protein | HMPREF1862_00596 | Not Available | Negative | 637014 - 637838 | 31260.7 |
| hypothetical protein | HMPREF1862_00597 | Not Available | Negative | 637868 - 638671 | 29991.6 |
| hypothetical protein | HMPREF1862_00598 | Not Available | Negative | 638692 - 639621 | 35376.9 |
| hypothetical protein | HMPREF1862_00599 | Not Available | Negative | 639597 - 640487 | 34167.9 |
| hypothetical protein | HMPREF1862_00600 | Not Available | Negative | 640508 - 641266 | 28948.9 |
| hypothetical protein | HMPREF1862_00601 | Not Available | Negative | 641260 - 642147 | 33645.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
