Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_00542 | Not Available | Positive | 591931 - 592314 | 14481.3 |
| hypothetical protein | HMPREF1862_00543 | Not Available | Negative | 592372 - 592548 | 6593.84 |
| hypothetical protein | HMPREF1862_00544 | Not Available | Negative | 592572 - 592871 | 11671.2 |
| hypothetical protein | HMPREF1862_00545 | Not Available | Negative | 594960 - 595622 | 25042.9 |
| hypothetical protein | HMPREF1862_00546 | Not Available | Positive | 595698 - 596249 | 20010.5 |
| hypothetical protein | HMPREF1862_00547 | Not Available | Positive | 596253 - 596837 | 21505.2 |
| hypothetical protein | HMPREF1862_00548 | Not Available | Positive | 596916 - 597965 | 37825.3 |
| hypothetical protein | HMPREF1862_00549 | Not Available | Positive | 597952 - 600510 | 93570.8 |
| hypothetical protein | HMPREF1862_00550 | Not Available | Negative | 600549 - 600680 | 4868.92 |
| hypothetical protein | HMPREF1862_00551 | Not Available | Positive | 601052 - 602362 | 47802.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
