Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_00342 | Not Available | Positive | 370059 - 371345 | 46781.7 |
| ribosomal protein s15 | HMPREF1862_00343 | Not Available | Positive | 371615 - 371950 | 12939.7 |
| guanosine pentaphosphate synthetase i/polyribonucleotide nucleotidyltransferase | HMPREF1862_00344 | Not Available | Positive | 372155 - 374512 | 86387.2 |
| hypothetical protein | HMPREF1862_00345 | Not Available | Positive | 374586 - 374990 | 14333.8 |
| peptidase m16 inactive domain protein | HMPREF1862_00346 | Not Available | Positive | 375055 - 376374 | 47272.3 |
| hypothetical protein | HMPREF1862_00347 | Not Available | Positive | 376384 - 376860 | 16907.0 |
| dihydrodipicolinate reductase | HMPREF1862_00348 | Not Available | Positive | 376862 - 377617 | 26141.5 |
| hypothetical protein | HMPREF1862_00349 | Not Available | Positive | 377706 - 378191 | 17510.1 |
| dihydrodipicolinate synthase | HMPREF1862_00350 | Not Available | Positive | 378306 - 379157 | 30193.0 |
| hypothetical protein | HMPREF1862_00351 | Not Available | Positive | 379413 - 381005 | 58401.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
