Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_01921 | Not Available | Positive | 2008023 - 2008643 | 22038.7 |
| molybdenum cofactor synthesis domain protein | HMPREF1862_01922 | Not Available | Negative | 2008644 - 2009195 | 19135.1 |
| transporter, major facilitator family protein | HMPREF1862_01923 | Not Available | Positive | 2009391 - 2010710 | 47786.1 |
| nitrate reductase, alpha subunit | HMPREF1862_01924 | Not Available | Positive | 2010785 - 2014486 | 137060.0 |
| nitrate reductase, beta subunit | HMPREF1862_01925 | Not Available | Positive | 2014528 - 2016021 | 55498.8 |
| nitrate reductase molybdenum cofactor assembly chaperone | HMPREF1862_01926 | Not Available | Positive | 2016018 - 2016743 | 26454.5 |
| respiratory nitrate reductase, gamma subunit | HMPREF1862_01927 | Not Available | Positive | 2016748 - 2017524 | 28304.8 |
| tobe domain protein | HMPREF1862_01928 | Not Available | Positive | 2017735 - 2018139 | 14486.4 |
| molybdate abc transporter, periplasmic molybdate-binding protein | HMPREF1862_01929 | Not Available | Positive | 2018136 - 2018933 | 27690.2 |
| molybdate abc transporter, permease protein | HMPREF1862_01930 | Not Available | Positive | 2018942 - 2020531 | 57009.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
