Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, sir2 family | HMPREF1862_01911 | Not Available | Negative | 2000753 - 2001598 | 29982.9 |
| twin arginine-targeting protein translocase, tata/e family | HMPREF1862_01912 | Not Available | Positive | 2001817 - 2002107 | 10035.9 |
| twin arginine-targeting protein translocase tatc | HMPREF1862_01913 | Not Available | Positive | 2002119 - 2002940 | 29968.6 |
| hypothetical protein | HMPREF1862_01914 | Not Available | Positive | 2003086 - 2003358 | 9875.61 |
| molybdenum cofactor biosynthesis protein a | HMPREF1862_01915 | Not Available | Positive | 2003394 - 2004428 | 37552.1 |
| this family protein | HMPREF1862_01916 | Not Available | Positive | 2004432 - 2004677 | 8132.49 |
| molybdopterin converting factor, subunit 2 | HMPREF1862_01917 | Not Available | Negative | 2004801 - 2005277 | 17006.0 |
| thif family protein | HMPREF1862_01918 | Not Available | Positive | 2005342 - 2006079 | 25214.4 |
| molybdenum cofactor synthesis domain protein | HMPREF1862_01919 | Not Available | Positive | 2006082 - 2007446 | 46929.9 |
| molybdenum cofactor biosynthesis protein | HMPREF1862_01920 | Not Available | Positive | 2007503 - 2008030 | 18645.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
