Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nadh dehydrogenase subunit m | HMPREF1862_01891 | Not Available | Negative | 1978271 - 1979836 | 55512.8 |
| proton-translocating nadh-quinone oxidoreductase, chain l | HMPREF1862_01892 | Not Available | Negative | 1979856 - 1981856 | 71290.1 |
| nadh dehydrogenase subunit k | HMPREF1862_01893 | Not Available | Negative | 1981872 - 1982171 | 10848.9 |
| nadh-ubiquinone/plastoquinone oxidoreductase chain 6 | HMPREF1862_01894 | Not Available | Negative | 1982171 - 1983196 | 36143.9 |
| nadh-quinone oxidoreductase, chain i | HMPREF1862_01895 | Not Available | Negative | 1983193 - 1983846 | 24650.9 |
| nadh dehydrogenase | HMPREF1862_01896 | Not Available | Negative | 1983839 - 1985188 | 49078.9 |
| nadh dehydrogenase, g subunit | HMPREF1862_01897 | Not Available | Negative | 1985185 - 1987788 | 92638.4 |
| putative nadh oxidoreductase, f subunit | HMPREF1862_01898 | Not Available | Negative | 1987785 - 1989098 | 47503.6 |
| nadh-quinone oxidoreductase, e subunit | HMPREF1862_01899 | Not Available | Negative | 1989095 - 1989889 | 28310.0 |
| nadh dehydrogenase subunit d | HMPREF1862_01900 | Not Available | Negative | 1989889 - 1991259 | 50753.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
