Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_01821 | Not Available | Negative | 1905287 - 1906015 | 26547.6 |
| hypothetical protein | HMPREF1862_01822 | Not Available | Negative | 1906026 - 1906316 | 9680.19 |
| hypothetical protein | HMPREF1862_01823 | Not Available | Negative | 1906316 - 1906897 | 20226.4 |
| hypothetical protein | HMPREF1862_01824 | Not Available | Positive | 1906970 - 1907290 | 11362.5 |
| hypothetical protein | HMPREF1862_01825 | Not Available | Negative | 1907372 - 1908781 | 50919.4 |
| hypothetical protein | HMPREF1862_01826 | Not Available | Negative | 1908791 - 1910179 | 50508.0 |
| hypothetical protein | HMPREF1862_01827 | Not Available | Negative | 1910176 - 1910334 | 5329.0 |
| hypothetical protein | HMPREF1862_01828 | Not Available | Negative | 1910331 - 1910486 | 5353.76 |
| hypothetical protein | HMPREF1862_01829 | Not Available | Negative | 1910479 - 1911102 | 21475.8 |
| signal peptidase i | HMPREF1862_01830 | Not Available | Negative | 1911095 - 1911565 | 16613.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
