Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_01761 | Not Available | Negative | 1862365 - 1862877 | 19408.1 |
| methionine aminopeptidase, type i | HMPREF1862_01762 | Not Available | Negative | 1863033 - 1863926 | 31891.7 |
| adenylate kinase | HMPREF1862_01763 | Not Available | Negative | 1863961 - 1864527 | 20886.2 |
| preprotein translocase, secy subunit | HMPREF1862_01764 | Not Available | Negative | 1864524 - 1865906 | 50412.4 |
| hypothetical protein | HMPREF1862_01765 | Not Available | Negative | 1866089 - 1866712 | 21853.9 |
| ribosomal protein l15 | HMPREF1862_01766 | Not Available | Negative | 1866991 - 1867488 | 17947.5 |
| ribosomal protein l30 | HMPREF1862_01767 | Not Available | Negative | 1867488 - 1867670 | 6870.45 |
| ribosomal protein s5 | HMPREF1862_01768 | Not Available | Negative | 1867670 - 1868359 | 24532.6 |
| ribosomal protein l18 | HMPREF1862_01769 | Not Available | Negative | 1868375 - 1868746 | 13576.5 |
| ribosomal protein l6 | HMPREF1862_01770 | Not Available | Negative | 1868747 - 1869283 | 19494.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
