Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_01591 | Not Available | Negative | 1694152 - 1695216 | 40051.0 |
| sigma-70, region 4 | HMPREF1862_01592 | Not Available | Positive | 1695757 - 1696293 | 20396.3 |
| hypothetical protein | HMPREF1862_01593 | Not Available | Positive | 1696390 - 1696671 | 10207.2 |
| hypothetical protein | HMPREF1862_01594 | Not Available | Positive | 1696671 - 1697069 | 14483.1 |
| hypothetical protein | HMPREF1862_01595 | Not Available | Positive | 1697066 - 1698205 | 41603.4 |
| hypothetical protein | HMPREF1862_01596 | Not Available | Positive | 1698229 - 1698801 | 20451.8 |
| dna-directed dna polymerase | HMPREF1862_01597 | Not Available | Positive | 1698873 - 1700795 | 70789.6 |
| hypothetical protein | HMPREF1862_01598 | Not Available | Negative | 1700792 - 1701181 | 14424.8 |
| hypothetical protein | HMPREF1862_01599 | Not Available | Negative | 1701200 - 1701496 | 10389.3 |
| hypothetical protein | HMPREF1862_01600 | Not Available | Negative | 1701501 - 1702271 | 28510.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
