Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribose-phosphate aldolase | HMPREF1862_01581 | Not Available | Negative | 1686164 - 1686817 | 22338.8 |
| putative deoxyribonucleoside regulator | HMPREF1862_01582 | Not Available | Negative | 1686930 - 1687907 | 36280.1 |
| hypothetical protein | HMPREF1862_01583 | Not Available | Negative | 1688137 - 1688349 | 7410.04 |
| putative chlorophyll synthesis pathway protein bchc | HMPREF1862_01584 | Not Available | Positive | 1688718 - 1689761 | 37106.6 |
| hypothetical protein | HMPREF1862_01585 | Not Available | Positive | 1689853 - 1690896 | 35339.5 |
| hypothetical protein | HMPREF1862_01586 | Not Available | Positive | 1691346 - 1691537 | 6992.62 |
| hypothetical protein | HMPREF1862_01587 | Not Available | Negative | 1691872 - 1692030 | 5799.86 |
| hypothetical protein | HMPREF1862_01588 | Not Available | Negative | 1692030 - 1692236 | 7634.37 |
| hypothetical protein | HMPREF1862_01589 | Not Available | Negative | 1692236 - 1693951 | 65625.4 |
| hypothetical protein | HMPREF1862_01590 | Not Available | Negative | 1693941 - 1694165 | 8329.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
