Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_01281 | Not Available | Positive | 1381578 - 1382471 | 31568.3 |
| transporter, betaine/carnitine/choline family | HMPREF1862_01282 | Not Available | Negative | 1382600 - 1384930 | 85207.0 |
| spfh/band 7/phb domain protein | HMPREF1862_01283 | Not Available | Negative | 1384998 - 1385912 | 33820.9 |
| Trna-gly | Not Available | Not Available | Positive | 1386142 - 1386217 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 1386256 - 1386326 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1386328 - 1386404 | Not Available |
| hypothetical protein | HMPREF1862_01287 | Not Available | Negative | 1386513 - 1386701 | 7101.76 |
| cna protein b-type domain protein | HMPREF1862_01288 | Not Available | Positive | 1386872 - 1388536 | 61328.4 |
| hypothetical protein | HMPREF1862_01289 | Not Available | Negative | 1388678 - 1389622 | 34630.5 |
| hypothetical protein | HMPREF1862_01290 | Not Available | Negative | 1389648 - 1390391 | 27558.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
