Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_01271 | Not Available | Negative | 1370872 - 1371099 | 8477.06 |
| putative phosphohistidine phosphatase sixa | HMPREF1862_01272 | Not Available | Positive | 1371151 - 1371639 | 17039.5 |
| glucose-1-phosphate adenylyltransferase | HMPREF1862_01273 | Not Available | Negative | 1371756 - 1372991 | 45476.0 |
| hypothetical protein | HMPREF1862_01274 | Not Available | Negative | 1373076 - 1373228 | 5528.83 |
| glycogen synthase, corynebacterium family | HMPREF1862_01275 | Not Available | Positive | 1373261 - 1374466 | 44115.7 |
| abc transporter, atp-binding protein | HMPREF1862_01276 | Not Available | Positive | 1374536 - 1375391 | 31158.6 |
| glutamine synthetase, beta-grasp domain protein | HMPREF1862_01277 | Not Available | Positive | 1375461 - 1376798 | 49855.7 |
| [glutamate--ammonia-ligase] adenylyltransferase | HMPREF1862_01278 | Not Available | Positive | 1376801 - 1379935 | 115719.0 |
| phosphoglycerate mutase family protein | HMPREF1862_01279 | Not Available | Positive | 1379963 - 1380664 | 25349.1 |
| hypothetical protein | HMPREF1862_01280 | Not Available | Negative | 1380738 - 1381442 | 26529.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
