Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase, seca subunit | HMPREF1862_01071 | Not Available | Positive | 1155789 - 1158566 | 104111.0 |
| hypothetical protein | HMPREF1862_01072 | Not Available | Negative | 1158716 - 1159339 | 22429.6 |
| hypothetical protein | HMPREF1862_01073 | Not Available | Positive | 1159632 - 1160171 | 19447.8 |
| histidine triad domain protein | HMPREF1862_01074 | Not Available | Negative | 1160168 - 1160596 | 15556.7 |
| hypothetical protein | HMPREF1862_01075 | Not Available | Negative | 1160610 - 1160732 | 4879.18 |
| cell division protein ftsz | HMPREF1862_01076 | Not Available | Positive | 1160790 - 1162130 | 47171.7 |
| hypothetical protein | HMPREF1862_01077 | Not Available | Positive | 1162137 - 1162883 | 26191.5 |
| hypothetical protein | HMPREF1862_01078 | Not Available | Positive | 1162993 - 1163457 | 16976.0 |
| hypothetical protein | HMPREF1862_01079 | Not Available | Positive | 1163461 - 1163790 | 12567.3 |
| diviva domain protein | HMPREF1862_01080 | Not Available | Positive | 1163973 - 1164773 | 29560.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
