Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase, alpha/beta domain protein | HMPREF1862_01011 | Not Available | Positive | 1089724 - 1090512 | 28023.2 |
| hypothetical protein | HMPREF1862_01012 | Not Available | Positive | 1090710 - 1091123 | 15059.0 |
| d12 class n6 adenine-specific dna methyltransferase | HMPREF1862_01013 | Not Available | Negative | 1091146 - 1092240 | 40652.4 |
| hypothetical protein | HMPREF1862_01014 | Not Available | Positive | 1092309 - 1093655 | 50225.6 |
| csbd-like protein | HMPREF1862_01015 | Not Available | Negative | 1093789 - 1094034 | 8443.78 |
| hypothetical protein | HMPREF1862_01016 | Not Available | Negative | 1094047 - 1094679 | 23110.3 |
| hypothetical protein | HMPREF1862_01017 | Not Available | Negative | 1094676 - 1095272 | 21253.1 |
| hypothetical protein | HMPREF1862_01018 | Not Available | Negative | 1095269 - 1095625 | 12908.4 |
| hypothetical protein | HMPREF1862_01019 | Not Available | Negative | 1095640 - 1095834 | 6508.14 |
| hypothetical protein | HMPREF1862_01021 | Not Available | Negative | 1095858 - 1096346 | 17266.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
