Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp41 | F126LOC_RS12620 | Not Available | Negative | 2871556 - 2871876 | 11575.7 |
| Ferredoxin | F126LOC_RS12625 | Not Available | Negative | 2872016 - 2872312 | 10875.5 |
| Gp14, phage major tail tube protein | F126LOC_RS12630 | Not Available | Negative | 2872369 - 2872893 | 19472.6 |
| Major tail sheath protein | F126LOC_RS12635 | Not Available | Negative | 2872893 - 2874320 | 51225.7 |
| Gp12 | F126LOC_RS12640 | Not Available | Negative | 2874310 - 2874507 | 7031.44 |
| Gp37 | F126LOC_RS12645 | Not Available | Negative | 2874504 - 2874971 | 17394.6 |
| Hypothetical protein | F126LOC_RS12650 | Not Available | Negative | 2875204 - 2875515 | 11880.5 |
| Hypothetical protein | F126LOC_RS12655 | Not Available | Negative | 2875508 - 2875837 | 12854.6 |
| Hypothetical protein | F126LOC_RS12660 | Not Available | Negative | 2875827 - 2876501 | 24516.9 |
| Endolysin | F126LOC_RS12665 | Not Available | Negative | 2876491 - 2877102 | 22967.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
