Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 1 protein | F126LOC_RS03770 | Not Available | Positive | 850166 - 851602 | 56355.5 |
| pts sugar transporter subunit iib | F126LOC_RS03775 | Not Available | Positive | 851632 - 851949 | 11538.2 |
| fcd domain-containing protein | F126LOC_RS03780 | Not Available | Positive | 852040 - 852807 | 28818.2 |
| gnat family n-acetyltransferase | F126LOC_RS03785 | Not Available | Positive | 852810 - 853283 | 18202.5 |
| bifunctional acyl-acp--phospholipid o-acyltransferase/long-chain-fatty-acid--acp ligase | F126LOC_RS03790 | Not Available | Positive | 853690 - 855861 | 79911.5 |
| lysophospholipid transporter lplt | F126LOC_RS03795 | Not Available | Positive | 855858 - 857081 | 42605.1 |
| gnat family n-acetyltransferase | F126LOC_RS03800 | Not Available | Positive | 857102 - 857557 | 17004.2 |
| entericidin a/b family lipoprotein | F126LOC_RS03805 | Not Available | Negative | 857652 - 857780 | 4345.37 |
| hsdr | F126LOC_RS03810 | Not Available | Negative | 857988 - 859082 | 40906.1 |
| type ii toxin-antitoxin system rele/pare family toxin | F126LOC_RS03815 | Not Available | Negative | 859318 - 859656 | 13115.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
