Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3060 domain-containing protein | F126LOC_RS03320 | Not Available | Negative | 751550 - 752056 | 17640.9 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | F126LOC_RS03325 | Not Available | Positive | 752502 - 755099 | 93695.4 |
| protein yacl | F126LOC_RS03330 | Not Available | Positive | 755305 - 755664 | 13817.1 |
| fructose-6-phosphate aldolase | F126LOC_RS03335 | Not Available | Negative | 755765 - 756430 | 23710.6 |
| pts ascorbate transporter subunit iic | F126LOC_RS03340 | Not Available | Negative | 756483 - 757742 | 44426.0 |
| pts sugar transporter subunit iib | F126LOC_RS03345 | Not Available | Negative | 757757 - 758044 | 9877.25 |
| pts sugar transporter subunit iia | F126LOC_RS03350 | Not Available | Negative | 758067 - 758510 | 15952.0 |
| laci family dna-binding transcriptional regulator | F126LOC_RS03355 | Not Available | Positive | 758815 - 760005 | 43561.6 |
| fatty acid desaturase | F126LOC_RS03360 | Not Available | Negative | 760184 - 761221 | 40291.3 |
| acyl-coa dehydrogenase family protein | F126LOC_RS03365 | Not Available | Negative | 761264 - 762880 | 61362.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
