Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | F126LOC_RS17545 | Not Available | Negative | 4045018 - 4045662 | 22016.1 |
| Putative tail-fiber/lysozyme protein | F126LOC_RS17550 | Not Available | Negative | 4045665 - 4047428 | 62788.4 |
| hypothetical protein | F126LOC_RS17555 | Not Available | Positive | 4047470 - 4047853 | 14488.1 |
| Hypothetical protein | F126LOC_RS17560 | Not Available | Negative | 4048127 - 4048528 | 14034.8 |
| Hypothetical protein | F126LOC_RS17565 | Not Available | Negative | 4048531 - 4048935 | 14568.2 |
| Hypothetical protein | F126LOC_RS17570 | Not Available | Negative | 4048941 - 4050095 | 41892.1 |
| Hypothetical protein | F126LOC_RS17575 | Not Available | Negative | 4050104 - 4050628 | 19912.6 |
| Hypothetical protein | F126LOC_RS17580 | Not Available | Negative | 4050628 - 4051050 | 15579.4 |
| Hypothetical protein | F126LOC_RS17585 | Not Available | Negative | 4051053 - 4051640 | 20738.1 |
| Hypothetical protein | F126LOC_RS17590 | Not Available | Negative | 4051637 - 4052050 | 14944.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
