Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s17 | F126LOC_RS02020 | Not Available | Positive | 460070 - 460324 | 9750.08 |
| 50s ribosomal protein l14 | F126LOC_RS02025 | Not Available | Positive | 460486 - 460857 | 13568.9 |
| 50s ribosomal protein l24 | F126LOC_RS02030 | Not Available | Positive | 460868 - 461182 | 11344.9 |
| 50s ribosomal protein l5 | F126LOC_RS02035 | Not Available | Positive | 461197 - 461736 | 20239.7 |
| 30s ribosomal protein s14 | F126LOC_RS02040 | Not Available | Positive | 461750 - 462055 | 11663.2 |
| 30s ribosomal protein s8 | F126LOC_RS02045 | Not Available | Positive | 462089 - 462481 | 14183.5 |
| 50s ribosomal protein l6 | F126LOC_RS02050 | Not Available | Positive | 462494 - 463027 | 18915.0 |
| 50s ribosomal protein l18 | F126LOC_RS02055 | Not Available | Positive | 463037 - 463390 | 12722.3 |
| 30s ribosomal protein s5 | F126LOC_RS02060 | Not Available | Positive | 463405 - 463905 | 17422.3 |
| 50s ribosomal protein l30 | F126LOC_RS02065 | Not Available | Positive | 463911 - 464090 | 6530.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
