Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s10 | F126LOC_RS01970 | Not Available | Positive | 455368 - 455679 | 11767.3 |
| 50s ribosomal protein l3 | F126LOC_RS01975 | Not Available | Positive | 455712 - 456341 | 22256.8 |
| 50s ribosomal protein l4 | F126LOC_RS01980 | Not Available | Positive | 456352 - 456957 | 22000.7 |
| 50s ribosomal protein l23 | F126LOC_RS01985 | Not Available | Positive | 456954 - 457256 | 11214.8 |
| 50s ribosomal protein l2 | F126LOC_RS01990 | Not Available | Positive | 457274 - 458095 | 29925.3 |
| 30s ribosomal protein s19 | F126LOC_RS01995 | Not Available | Positive | 458112 - 458390 | 10444.9 |
| 50s ribosomal protein l22 | F126LOC_RS02000 | Not Available | Positive | 458405 - 458737 | 12101.8 |
| 30s ribosomal protein s3 | F126LOC_RS02005 | Not Available | Positive | 458755 - 459456 | 26058.8 |
| 50s ribosomal protein l16 | F126LOC_RS02010 | Not Available | Positive | 459469 - 459879 | 15322.1 |
| 50s ribosomal protein l29 | F126LOC_RS02015 | Not Available | Positive | 459879 - 460070 | 7174.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
