Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribulokinase | F126LOC_RS01820 | Not Available | Negative | 426584 - 427453 | 32598.9 |
| yheu family protein | F126LOC_RS01825 | Not Available | Negative | 427578 - 427814 | 8934.51 |
| hydrolase | F126LOC_RS01830 | Not Available | Negative | 427811 - 428851 | 39168.3 |
| lyse family translocator | F126LOC_RS01835 | Not Available | Positive | 428958 - 429560 | 21874.8 |
| 5-bromo-4-chloroindolyl phosphate hydrolysis family protein | F126LOC_RS01840 | Not Available | Negative | 429641 - 430654 | 37920.2 |
| toxic anion resistance protein | F126LOC_RS01845 | Not Available | Negative | 430689 - 431873 | 44314.3 |
| abc transporter atp-binding protein | F126LOC_RS01850 | Not Available | Negative | 432098 - 434005 | 71461.3 |
| glutathione-regulated potassium-efflux system ancillary protein kefg | F126LOC_RS01855 | Not Available | Positive | 434131 - 434682 | 21292.5 |
| glutathione-regulated potassium-efflux system protein kefb | F126LOC_RS01860 | Not Available | Positive | 434684 - 436495 | 66511.8 |
| yhev family putative zinc ribbon protein | F126LOC_RS01865 | Not Available | Positive | 436520 - 436714 | 6915.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
