Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltodextrin phosphorylase | F126LOC_RS01425 | Not Available | Positive | 326024 - 328546 | 94327.6 |
| 4-alpha-glucanotransferase | F126LOC_RS01430 | Not Available | Positive | 328559 - 330643 | 78457.4 |
| fe-s biogenesis protein nfua | F126LOC_RS01435 | Not Available | Negative | 330713 - 331288 | 21104.1 |
| dna utilization protein gntx | F126LOC_RS01440 | Not Available | Negative | 331349 - 332050 | 26714.7 |
| pimeloyl-acp methyl ester esterase bioh | F126LOC_RS01445 | Not Available | Positive | 332134 - 332901 | 27586.3 |
| multidrug efflux rnd transporter permease acrd | F126LOC_RS01450 | Not Available | Positive | 333084 - 336200 | 112942.0 |
| lyse family translocator | F126LOC_RS01455 | Not Available | Positive | 336347 - 336961 | 22447.2 |
| hypothetical protein | F126LOC_RS22280 | Not Available | Positive | 337088 - 337444 | 13014.7 |
| glxa family transcriptional regulator | F126LOC_RS01460 | Not Available | Positive | 337431 - 338072 | 23838.8 |
| alkaline phosphatase | F126LOC_RS01465 | Not Available | Positive | 338197 - 339942 | 63796.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
