Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | F126LOC_RS01375 | Not Available | Negative | 310515 - 312233 | 62963.2 |
| 1,4-alpha-glucan branching enzyme | F126LOC_RS01380 | Not Available | Positive | 312605 - 314782 | 83518.4 |
| glycogen debranching protein glgx | F126LOC_RS01385 | Not Available | Positive | 314783 - 316759 | 73917.3 |
| glucose-1-phosphate adenylyltransferase | F126LOC_RS01390 | Not Available | Positive | 316795 - 318072 | 47785.3 |
| glycogen synthase glga | F126LOC_RS01395 | Not Available | Positive | 318101 - 319540 | 52589.1 |
| glycogen phosphorylase | F126LOC_RS01400 | Not Available | Positive | 319616 - 322063 | 93580.6 |
| glycerol-3-phosphate dehydrogenase | F126LOC_RS01405 | Not Available | Negative | 322153 - 323652 | 56344.1 |
| thiosulfate sulfurtransferase glpe | F126LOC_RS01410 | Not Available | Positive | 323973 - 324296 | 11787.6 |
| rhomboid family intramembrane serine protease glpg | F126LOC_RS01415 | Not Available | Positive | 324365 - 325198 | 31503.6 |
| deor/glpr family transcriptional regulator | F126LOC_RS01420 | Not Available | Positive | 325223 - 325981 | 28343.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
