Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4026 domain-containing protein | F126LOC_RS22120 | Not Available | Positive | 5021788 - 5023215 | 54626.9 |
| phosphate abc transporter substrate-binding protein psts | F126LOC_RS22125 | Not Available | Positive | 5023427 - 5024467 | 36796.5 |
| phosphate abc transporter permease pstc | F126LOC_RS22130 | Not Available | Positive | 5024630 - 5025589 | 34130.9 |
| phosphate abc transporter permease psta | F126LOC_RS22135 | Not Available | Positive | 5025589 - 5026476 | 32215.5 |
| phosphate abc transporter atp-binding protein pstb | F126LOC_RS22140 | Not Available | Positive | 5026563 - 5027336 | 28987.8 |
| phosphate signaling complex protein phou | F126LOC_RS22145 | Not Available | Positive | 5027349 - 5028080 | 27656.5 |
| helix-turn-helix domain-containing protein | F126LOC_RS22150 | Not Available | Negative | 5028125 - 5028691 | 20708.5 |
| benzoate/h(+) symporter bene family transporter | F126LOC_RS22155 | Not Available | Positive | 5028783 - 5029967 | 40930.1 |
| abc transporter substrate-binding protein | F126LOC_RS22160 | Not Available | Positive | 5030095 - 5030931 | 30279.2 |
| amino acid abc transporter permease | F126LOC_RS22165 | Not Available | Positive | 5031030 - 5031773 | 27449.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
