Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymyristoyl-acp dehydratase | F126LOC_RS22070 | Not Available | Positive | 5012146 - 5012535 | 14648.8 |
| glycosyltransferase family 2 protein | F126LOC_RS22075 | Not Available | Positive | 5012526 - 5014238 | 63867.3 |
| acyl-coa thioesterase | F126LOC_RS22080 | Not Available | Positive | 5014241 - 5014663 | 16263.3 |
| lola family protein | F126LOC_RS22085 | Not Available | Positive | 5014660 - 5015265 | 22913.8 |
| mmpl family transporter | F126LOC_RS22090 | Not Available | Positive | 5015237 - 5017558 | 83845.7 |
| duf3261 domain-containing protein | F126LOC_RS22095 | Not Available | Positive | 5017555 - 5018130 | 21375.1 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | F126LOC_RS22100 | Not Available | Positive | 5018132 - 5019289 | 40475.0 |
| hotdog family protein | F126LOC_RS22105 | Not Available | Positive | 5019282 - 5019764 | 17616.1 |
| 3-ketoacyl-acp reductase fabg2 | F126LOC_RS22110 | Not Available | Positive | 5019803 - 5020534 | 25910.5 |
| beta-ketoacyl-acp synthase | F126LOC_RS22115 | Not Available | Positive | 5020534 - 5021760 | 43933.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
