Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional metallophosphatase/5'-nucleotidase | F126LOC_RS21670 | Not Available | Positive | 4920356 - 4922251 | 69824.2 |
| nad(p)/fad-dependent oxidoreductase | F126LOC_RS21675 | Not Available | Negative | 4922354 - 4923667 | 47867.0 |
| nadp-specific glutamate dehydrogenase | F126LOC_RS21680 | Not Available | Negative | 4923841 - 4925184 | 48147.7 |
| universal stress protein uspa | F126LOC_RS21685 | Not Available | Negative | 4925476 - 4925913 | 16101.2 |
| universal stress protein uspb | F126LOC_RS21690 | Not Available | Positive | 4926467 - 4926802 | 13050.2 |
| inorganic phosphate transporter pita | F126LOC_RS21695 | Not Available | Negative | 4926935 - 4928440 | 54274.4 |
| nad(p)/fad-dependent oxidoreductase | F126LOC_RS21700 | Not Available | Positive | 4928719 - 4929918 | 43593.1 |
| eal domain-containing protein | F126LOC_RS21705 | Not Available | Positive | 4930011 - 4931618 | 60842.5 |
| ail/lom family outer membrane beta-barrel protein | F126LOC_RS21710 | Not Available | Negative | 4931662 - 4932186 | 18872.0 |
| Trna-pro | Not Available | Not Available | Positive | 4932622 - 4932698 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
