Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antiviral radar system adenosine triphosphatase rdra | F126LOC_RS20925 | Not Available | Positive | 4758053 - 4760386 | 90378.1 |
| antiviral radar system adenosine deaminase rdrb | F126LOC_RS20930 | Not Available | Positive | 4760389 - 4762962 | 99874.8 |
| starvation-sensing protein rspa | F126LOC_RS20935 | Not Available | Negative | 4763040 - 4764239 | 45113.0 |
| pts transporter subunit eiic | F126LOC_RS20940 | Not Available | Positive | 4764562 - 4765935 | 49162.2 |
| phosphoenolpyruvate carboxylase | F126LOC_RS20945 | Not Available | Positive | 4766178 - 4768817 | 98586.6 |
| tyrosine-protein phosphatase | F126LOC_RS20950 | Not Available | Negative | 4768901 - 4769683 | 28888.4 |
| uridine phosphorylase | F126LOC_RS20955 | Not Available | Negative | 4769833 - 4770603 | 27199.8 |
| dienelactone hydrolase family protein | F126LOC_RS20960 | Not Available | Positive | 4770936 - 4771763 | 30430.0 |
| methyl-accepting chemotaxis protein | F126LOC_RS20965 | Not Available | Negative | 4771866 - 4773527 | 59326.1 |
| methyl-accepting chemotaxis protein | F126LOC_RS20970 | Not Available | Negative | 4774211 - 4775839 | 58128.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
