Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zape | F126LOC_RS20225 | Not Available | Negative | 4614321 - 4615472 | 44051.8 |
| z-ring associated protein zapg | F126LOC_RS20230 | Not Available | Positive | 4615694 - 4616098 | 15324.2 |
| serine endoprotease degq | F126LOC_RS20235 | Not Available | Positive | 4616359 - 4617729 | 47814.6 |
| outer membrane-stress sensor serine endopeptidase degs | F126LOC_RS20240 | Not Available | Positive | 4617867 - 4618964 | 38716.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | F126LOC_RS20245 | Not Available | Negative | 4619072 - 4620334 | 44919.4 |
| bola family iron metabolism protein ibag | F126LOC_RS20250 | Not Available | Negative | 4620418 - 4620672 | 9462.37 |
| lipid asymmetry maintenance protein mlab | F126LOC_RS20255 | Not Available | Negative | 4620807 - 4621097 | 10425.5 |
| phospholipid-binding protein mlac | F126LOC_RS20260 | Not Available | Negative | 4621111 - 4621740 | 23755.5 |
| outer membrane lipid asymmetry maintenance protein mlad | F126LOC_RS20265 | Not Available | Negative | 4621753 - 4622319 | 20267.2 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | F126LOC_RS20270 | Not Available | Negative | 4622324 - 4623106 | 27853.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
