Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bglg family transcription antiterminator | F126LOC_RS20025 | Not Available | Positive | 4572472 - 4574022 | 59394.6 |
| pts sugar transporter subunit iia | F126LOC_RS20030 | Not Available | Positive | 4574071 - 4574550 | 17707.9 |
| pts fructose transporter subunit iib | F126LOC_RS20035 | Not Available | Positive | 4574564 - 4574878 | 11037.6 |
| pts fructose transporter subunit iic | F126LOC_RS20040 | Not Available | Positive | 4574904 - 4575995 | 38707.1 |
| class ii fructose-bisphosphate aldolase | F126LOC_RS20045 | Not Available | Positive | 4576007 - 4576858 | 30062.8 |
| ketose-bisphosphate aldolase | F126LOC_RS20050 | Not Available | Positive | 4576945 - 4577808 | 31368.7 |
| nad(p)h-dependent oxidoreductase | F126LOC_RS20055 | Not Available | Positive | 4578012 - 4578593 | 21778.8 |
| lysr family transcriptional regulator | F126LOC_RS20060 | Not Available | Negative | 4578634 - 4579530 | 33489.5 |
| 3-oxoacyl-acp reductase family protein | F126LOC_RS20065 | Not Available | Negative | 4579686 - 4580426 | 24948.7 |
| tetr/acrr family transcriptional regulator | F126LOC_RS20070 | Not Available | Positive | 4580509 - 4581168 | 23720.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
