Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | F126LOC_RS19975 | Not Available | Positive | 4559338 - 4560501 | 42176.4 |
| 2,5-didehydrogluconate reductase dkga | F126LOC_RS19980 | Not Available | Positive | 4560896 - 4561723 | 31091.2 |
| gntr family transcriptional regulator | F126LOC_RS19985 | Not Available | Negative | 4561771 - 4562508 | 27192.9 |
| cell division protein ftsp | F126LOC_RS19990 | Not Available | Negative | 4562896 - 4564311 | 51619.4 |
| 1-acylglycerol-3-phosphate o-acyltransferase | F126LOC_RS19995 | Not Available | Negative | 4564414 - 4565151 | 27521.8 |
| dna topoisomerase iv subunit a | F126LOC_RS20000 | Not Available | Negative | 4565302 - 4567572 | 84012.4 |
| sukh-3 domain-containing protein | F126LOC_RS20005 | Not Available | Negative | 4567800 - 4568303 | 18061.4 |
| hypothetical protein | F126LOC_RS20010 | Not Available | Negative | 4568339 - 4568989 | 23848.8 |
| duf2314 domain-containing protein | F126LOC_RS20015 | Not Available | Negative | 4569037 - 4569372 | 12756.0 |
| tonb-dependent receptor domain-containing protein | F126LOC_RS20020 | Not Available | Positive | 4569617 - 4572019 | 87833.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
