Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | F126LOC_RS01125 | Not Available | Positive | 257268 - 258017 | 28152.1 |
| bifunctional threonine/serine apc transporter thrp | F126LOC_RS01130 | Not Available | Positive | 258324 - 259715 | 50262.8 |
| Trna-arg | Not Available | Not Available | Positive | 259855 - 259931 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 260053 - 260128 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 260171 - 260257 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 260301 - 260377 | Not Available |
| histidine-type phosphatase | F126LOC_RS01155 | Not Available | Negative | 260501 - 261808 | 48449.6 |
| adenylosuccinate lyase | F126LOC_RS01160 | Not Available | Positive | 262056 - 263420 | 50113.4 |
| gnat family n-acetyltransferase | F126LOC_RS01165 | Not Available | Positive | 263430 - 263972 | 20476.7 |
| amino acid abc transporter substrate-binding protein | F126LOC_RS01170 | Not Available | Positive | 263969 - 264760 | 28880.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
