Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F126LOC_RS19725 | Not Available | Positive | 4504751 - 4504915 | 6012.83 |
| alpha/beta hydrolase | F126LOC_RS19730 | Not Available | Positive | 4504906 - 4505096 | 7523.25 |
| n-6 dna methylase | F126LOC_RS19735 | Not Available | Positive | 4505343 - 4506950 | 59778.2 |
| restriction endonuclease subunit s | F126LOC_RS19740 | Not Available | Positive | 4506947 - 4508440 | 55708.7 |
| aaa family atpase | F126LOC_RS19745 | Not Available | Positive | 4508440 - 4510152 | 65875.1 |
| hypothetical protein | F126LOC_RS19750 | Not Available | Positive | 4510155 - 4511279 | 43666.8 |
| alpha/beta hydrolase | F126LOC_RS19755 | Not Available | Negative | 4511766 - 4512907 | 40597.7 |
| Trna-leu | Not Available | Not Available | Positive | 4513099 - 4513183 | Not Available |
| lps export abc transporter permease lptg | F126LOC_RS19765 | Not Available | Negative | 4513417 - 4514493 | 39393.4 |
| lps export abc transporter permease lptf | F126LOC_RS19770 | Not Available | Negative | 4514493 - 4515608 | 41247.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
