Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | F126LOC_RS18535 | Not Available | Positive | 4251965 - 4252384 | 15144.1 |
| hypothetical protein | F126LOC_RS22420 | Not Available | Positive | 4252716 - 4253351 | 23584.0 |
| alpha/beta hydrolase | F126LOC_RS22490 | Not Available | Positive | 4253957 - 4254115 | 5166.35 |
| Trna-leu | Not Available | Not Available | Positive | 4254299 - 4254385 | Not Available |
| preprotein translocase subunit secg | F126LOC_RS18565 | Not Available | Negative | 4254410 - 4254742 | 11366.9 |
| phosphoglucosamine mutase | F126LOC_RS18570 | Not Available | Negative | 4254992 - 4256329 | 47694.7 |
| dihydropteroate synthase | F126LOC_RS18575 | Not Available | Negative | 4256337 - 4257170 | 29892.3 |
| atp-dependent zinc metalloprotease ftsh | F126LOC_RS18580 | Not Available | Negative | 4257288 - 4259228 | 70992.6 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | F126LOC_RS18585 | Not Available | Negative | 4259285 - 4259914 | 23275.4 |
| ribosome assembly rna-binding protein yhby | F126LOC_RS18590 | Not Available | Positive | 4260058 - 4260351 | 10713.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
