Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-propeller fold lactonase family protein | F126LOC_RS17975 | Not Available | Negative | 4126523 - 4136224 | 336188.0 |
| tad domain-containing protein | F126LOC_RS17980 | Not Available | Negative | 4136282 - 4137901 | 59488.9 |
| tade/tadg family type iv pilus assembly protein | F126LOC_RS17985 | Not Available | Negative | 4138097 - 4138747 | 23704.8 |
| hypothetical protein | F126LOC_RS17990 | Not Available | Negative | 4138740 - 4139291 | 20246.3 |
| tetratricopeptide repeat protein | F126LOC_RS17995 | Not Available | Negative | 4139291 - 4140142 | 30028.2 |
| type ii secretion system f family protein | F126LOC_RS18000 | Not Available | Negative | 4140233 - 4141192 | 34763.2 |
| type ii secretion system f family protein | F126LOC_RS18005 | Not Available | Negative | 4141207 - 4142187 | 36512.8 |
| cpaf family protein | F126LOC_RS18010 | Not Available | Negative | 4142206 - 4143609 | 51888.8 |
| aaa family atpase | F126LOC_RS18015 | Not Available | Negative | 4143649 - 4144848 | 43259.2 |
| cpad family pilus assembly protein | F126LOC_RS18020 | Not Available | Negative | 4144863 - 4145549 | 24794.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
