Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zipa | F126LOC_RS17220 | Not Available | Negative | 3969644 - 3970702 | 38212.1 |
| sulfate transporter cysz | F126LOC_RS17225 | Not Available | Positive | 3970906 - 3971736 | 31202.9 |
| cysteine synthase a | F126LOC_RS17230 | Not Available | Positive | 3971899 - 3972867 | 34638.8 |
| phosphocarrier protein hpr | F126LOC_RS17235 | Not Available | Positive | 3973300 - 3973557 | 9089.86 |
| phosphoenolpyruvate-protein phosphotransferase ptsi | F126LOC_RS17240 | Not Available | Positive | 3973603 - 3975330 | 63489.5 |
| pts glucose transporter subunit iia | F126LOC_RS17245 | Not Available | Positive | 3975479 - 3975988 | 18249.2 |
| atp-binding protein | F126LOC_RS17250 | Not Available | Negative | 3976054 - 3977421 | 50765.5 |
| response regulator transcription factor | F126LOC_RS17255 | Not Available | Negative | 3977421 - 3978101 | 25378.6 |
| efflux rnd transporter periplasmic adaptor subunit | F126LOC_RS17260 | Not Available | Positive | 3978352 - 3979551 | 42454.7 |
| macb family efflux pump subunit | F126LOC_RS17265 | Not Available | Positive | 3979555 - 3981507 | 70445.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
