Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sty4534 family ice replication protein | F126LOC_RS16720 | Not Available | Negative | 3846118 - 3846615 | 17876.8 |
| dna topoisomerase iii | F126LOC_RS16725 | Not Available | Negative | 3847243 - 3849273 | 75399.9 |
| pfl_4669 family integrating conjugative element protein | F126LOC_RS16730 | Not Available | Negative | 3849273 - 3850052 | 28660.1 |
| sty4528 family pathogenicity island replication protein | F126LOC_RS16735 | Not Available | Negative | 3850469 - 3851665 | 44642.3 |
| hypothetical protein | F126LOC_RS16740 | Not Available | Negative | 3851848 - 3852102 | 10195.3 |
| duf2857 domain-containing protein | F126LOC_RS16745 | Not Available | Negative | 3852111 - 3852704 | 22200.6 |
| parb family protein | F126LOC_RS16750 | Not Available | Negative | 3853024 - 3854754 | 64407.5 |
| spi-7-type island replicative dna helicase | F126LOC_RS16755 | Not Available | Negative | 3854754 - 3856121 | 50546.3 |
| hypothetical protein | F126LOC_RS16760 | Not Available | Negative | 3856114 - 3856509 | 14903.5 |
| para family protein | F126LOC_RS16765 | Not Available | Negative | 3856509 - 3857411 | 32967.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
