Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F126LOC_RS16370 | Not Available | Negative | 3789338 - 3790264 | 35780.8 |
| hypothetical protein | F126LOC_RS16375 | Not Available | Negative | 3790343 - 3791236 | 33821.4 |
| ardc-like ssdna-binding domain-containing protein | F126LOC_RS16380 | Not Available | Negative | 3791310 - 3793265 | 72526.7 |
| hypothetical protein | F126LOC_RS16385 | Not Available | Negative | 3793330 - 3793815 | 18821.4 |
| hypothetical protein | F126LOC_RS16390 | Not Available | Negative | 3793888 - 3794160 | 10192.0 |
| hypothetical protein | F126LOC_RS16395 | Not Available | Negative | 3794157 - 3794600 | 17053.5 |
| hypothetical protein | F126LOC_RS16400 | Not Available | Negative | 3794612 - 3794821 | 7689.57 |
| radc family protein | F126LOC_RS16405 | Not Available | Negative | 3794920 - 3795396 | 17827.6 |
| antirestriction protein | F126LOC_RS16410 | Not Available | Negative | 3795881 - 3796519 | 23612.8 |
| hypothetical protein | F126LOC_RS16415 | Not Available | Negative | 3796609 - 3797082 | 18624.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
