Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | F126LOC_RS14270 | Not Available | Positive | 3292570 - 3293322 | 28418.6 |
| 3-deoxy-7-phosphoheptulonate synthase arog | F126LOC_RS14275 | Not Available | Negative | 3293407 - 3294462 | 38544.1 |
| cdf family zinc transporter zitb | F126LOC_RS14280 | Not Available | Positive | 3294759 - 3295709 | 35145.7 |
| nicotinamide riboside transporter pnuc | F126LOC_RS14285 | Not Available | Negative | 3295717 - 3296442 | 27284.8 |
| quinolinate synthase nada | F126LOC_RS14290 | Not Available | Negative | 3296502 - 3297563 | 38546.3 |
| yjaa family stress response protein | F126LOC_RS14295 | Not Available | Positive | 3297786 - 3298184 | 14913.3 |
| duf554 domain-containing protein | F126LOC_RS14300 | Not Available | Negative | 3298199 - 3298915 | 25408.4 |
| Trna-lys | Not Available | Not Available | Positive | 3299320 - 3299395 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3299438 - 3299513 | Not Available |
| cell division protein cpob | F126LOC_RS14315 | Not Available | Negative | 3299689 - 3300465 | 28050.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
