Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrz family multidrug efflux pump-associated protein | F126LOC_RS14220 | Not Available | Negative | 3280456 - 3280611 | 5660.29 |
| molybdenum-dependent transcriptional regulator | F126LOC_RS14225 | Not Available | Positive | 3280808 - 3281599 | 28735.8 |
| molybdate abc transporter atp-binding protein modf | F126LOC_RS14230 | Not Available | Positive | 3281640 - 3283115 | 55270.1 |
| udp-glucose 4-epimerase gale | F126LOC_RS14235 | Not Available | Positive | 3283314 - 3284333 | 37224.9 |
| galactose-1-epimerase | F126LOC_RS14240 | Not Available | Positive | 3284458 - 3285504 | 38739.0 |
| hypothetical protein | F126LOC_RS14245 | Not Available | Positive | 3285643 - 3286098 | 16507.7 |
| copper-binding protein | F126LOC_RS14250 | Not Available | Positive | 3286174 - 3286527 | 12755.3 |
| tolc family protein | F126LOC_RS14255 | Not Available | Positive | 3286540 - 3287799 | 46210.8 |
| efflux rnd transporter periplasmic adaptor subunit | F126LOC_RS14260 | Not Available | Positive | 3287796 - 3289298 | 54150.4 |
| efflux rnd transporter permease subunit | F126LOC_RS14265 | Not Available | Positive | 3289295 - 3292432 | 114877.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
