Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter family glucose-6-phosphate receptor uhpc | F126LOC_RS13720 | Not Available | Positive | 3115562 - 3116887 | 49204.1 |
| abc transporter substrate-binding protein | F126LOC_RS13725 | Not Available | Positive | 3116923 - 3117957 | 37663.7 |
| abc transporter permease | F126LOC_RS13730 | Not Available | Positive | 3118164 - 3120242 | 75846.3 |
| ferric abc transporter atp-binding protein | F126LOC_RS13735 | Not Available | Positive | 3120248 - 3121306 | 39289.4 |
| is110 family transposase | F126LOC_RS13740 | Not Available | Positive | 3121628 - 3122614 | 36132.3 |
| laci family dna-binding transcriptional regulator | F126LOC_RS13745 | Not Available | Positive | 3122905 - 3123981 | 39001.9 |
| beta-galactosidase | F126LOC_RS13750 | Not Available | Positive | 3124292 - 3127423 | 119900.0 |
| mfs transporter | F126LOC_RS13755 | Not Available | Positive | 3127679 - 3128941 | 47234.8 |
| Trna-asn | Not Available | Not Available | Positive | 3129084 - 3129159 | Not Available |
| non-ribosomal peptide synthase/polyketide synthase | F126LOC_RS13765 | Not Available | Positive | 3129769 - 3155517 | 947420.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
