Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | F126LOC_RS13620 | Not Available | Positive | 3089199 - 3090032 | 31861.4 |
| dmt family transporter | F126LOC_RS13625 | Not Available | Positive | 3090132 - 3091127 | 36507.8 |
| tlpa family protein disulfide reductase | F126LOC_RS13630 | Not Available | Negative | 3091163 - 3091660 | 17750.2 |
| abc transporter atp-binding protein | F126LOC_RS13635 | Not Available | Negative | 3091647 - 3092363 | 26565.8 |
| abc transporter permease | F126LOC_RS13640 | Not Available | Negative | 3092368 - 3093507 | 41057.0 |
| abc transporter permease | F126LOC_RS13645 | Not Available | Negative | 3093497 - 3094786 | 46340.9 |
| fe-s-containing protein | F126LOC_RS13650 | Not Available | Negative | 3094789 - 3096186 | 51063.9 |
| iron transporter | F126LOC_RS13655 | Not Available | Negative | 3096341 - 3096868 | 18929.7 |
| ftr1 family iron permease | F126LOC_RS13660 | Not Available | Negative | 3096988 - 3098892 | 69965.8 |
| methyl-accepting chemotaxis protein | F126LOC_RS13665 | Not Available | Negative | 3099399 - 3101078 | 60937.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
