Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | F126LOC_RS13420 | Not Available | Negative | 3034738 - 3035352 | 22672.4 |
| luxr family transcriptional regulator | F126LOC_RS13425 | Not Available | Positive | 3035847 - 3036584 | 28334.4 |
| abc transporter atp-binding protein | F126LOC_RS13430 | Not Available | Negative | 3036599 - 3038371 | 64814.1 |
| abc transporter atp-binding protein | F126LOC_RS13435 | Not Available | Negative | 3038371 - 3040194 | 66463.8 |
| helix-turn-helix transcriptional regulator | F126LOC_RS13440 | Not Available | Positive | 3040426 - 3041394 | 35282.2 |
| hypothetical protein | F126LOC_RS13445 | Not Available | Positive | 3041507 - 3041929 | 15898.8 |
| mfs transporter | F126LOC_RS13450 | Not Available | Positive | 3041926 - 3043173 | 45182.7 |
| tonb-dependent siderophore receptor | F126LOC_RS13455 | Not Available | Positive | 3043366 - 3045375 | 72995.1 |
| cdp-diacylglycerol diphosphatase | F126LOC_RS13460 | Not Available | Positive | 3045608 - 3046366 | 28206.7 |
| lysr family transcriptional regulator | F126LOC_RS13465 | Not Available | Positive | 3046628 - 3047566 | 35332.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
