Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin synthase catalytic subunit moae | F126LOC_RS12855 | Not Available | Negative | 2920806 - 2921258 | 17024.0 |
| molybdopterin synthase sulfur carrier subunit | F126LOC_RS12860 | Not Available | Negative | 2921261 - 2921506 | 8856.66 |
| cyclic pyranopterin monophosphate synthase moac | F126LOC_RS12865 | Not Available | Negative | 2921503 - 2921997 | 17365.2 |
| molybdenum cofactor biosynthesis protein b | F126LOC_RS12870 | Not Available | Negative | 2922016 - 2922534 | 18776.2 |
| gtp 3',8-cyclase moaa | F126LOC_RS12875 | Not Available | Negative | 2922569 - 2923558 | 37145.5 |
| uridine diphosphate-n-acetylglucosamine-binding protein yvck | F126LOC_RS12880 | Not Available | Positive | 2924106 - 2925038 | 33463.6 |
| glyoxalase | F126LOC_RS12885 | Not Available | Negative | 2925014 - 2925445 | 15731.8 |
| excinuclease abc subunit uvrb | F126LOC_RS12890 | Not Available | Negative | 2925474 - 2927486 | 75793.0 |
| hypothetical protein | F126LOC_RS12895 | Not Available | Negative | 2928362 - 2928793 | 15987.3 |
| hypothetical protein | F126LOC_RS12900 | Not Available | Negative | 2928830 - 2929261 | 16266.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
