Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase peln | F126LOC_RS11745 | Not Available | Negative | 2675206 - 2676519 | 47015.9 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | F126LOC_RS11750 | Not Available | Negative | 2676823 - 2677575 | 27551.9 |
| trm112 family protein | F126LOC_RS11755 | Not Available | Negative | 2677572 - 2677754 | 6784.34 |
| tetraacyldisaccharide 4'-kinase | F126LOC_RS11760 | Not Available | Negative | 2677866 - 2678867 | 37046.5 |
| lipid a abc transporter atp-binding protein/permease msba | F126LOC_RS11765 | Not Available | Negative | 2678864 - 2680612 | 64312.7 |
| comec family protein | F126LOC_RS11770 | Not Available | Negative | 2680650 - 2682923 | 86021.7 |
| pts system regulator tmar | F126LOC_RS11775 | Not Available | Negative | 2683265 - 2683582 | 12595.3 |
| abc transporter atp-binding protein | F126LOC_RS11780 | Not Available | Negative | 2683716 - 2684474 | 28080.0 |
| iron chelate uptake abc transporter family permease subunit | F126LOC_RS11785 | Not Available | Negative | 2684471 - 2685478 | 36280.2 |
| abc transporter permease | F126LOC_RS11790 | Not Available | Negative | 2685465 - 2686427 | 34459.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
