Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulose biosynthesis cyclic di-gmp-binding regulatory protein bcsb | F126LOC_RS00375 | Not Available | Negative | 91267 - 93585 | 85468.3 |
| udp-forming cellulose synthase catalytic subunit | F126LOC_RS00380 | Not Available | Negative | 93660 - 96359 | 102134.0 |
| cellulose biosynthesis protein bcsq | F126LOC_RS00385 | Not Available | Negative | 96356 - 97093 | 27352.9 |
| cellulose biosynthesis protein bcsr | F126LOC_RS00390 | Not Available | Negative | 97096 - 97305 | 7764.08 |
| cellulose biosynthesis protein bcse | F126LOC_RS00395 | Not Available | Positive | 97646 - 99250 | 60503.3 |
| cellulose biosynthesis protein bcsf | F126LOC_RS00400 | Not Available | Positive | 99247 - 99465 | 8334.37 |
| cellulose biosynthesis protein bcsg | F126LOC_RS00405 | Not Available | Positive | 99467 - 101125 | 61403.8 |
| diguanylate cyclase domain-containing protein | F126LOC_RS00410 | Not Available | Positive | 101493 - 102644 | 42593.8 |
| dicarboxylate/amino acid:cation symporter | F126LOC_RS00415 | Not Available | Positive | 102964 - 104256 | 45613.3 |
| m16 family metallopeptidase | F126LOC_RS00420 | Not Available | Positive | 104598 - 106112 | 56227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
