Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tagatose-bisphosphate aldolase | F126LOC_RS10845 | Not Available | Positive | 2459188 - 2460087 | 32516.2 |
| spovr family protein | F126LOC_RS10850 | Not Available | Positive | 2460330 - 2461871 | 60673.8 |
| fatty acid metabolism transcriptional regulator fadr | F126LOC_RS10855 | Not Available | Negative | 2461976 - 2462695 | 27084.4 |
| sodium/proton antiporter nhab | F126LOC_RS10860 | Not Available | Positive | 2462926 - 2464506 | 58201.3 |
| disulfide bond formation protein dsbb | F126LOC_RS10865 | Not Available | Positive | 2464701 - 2465231 | 20145.0 |
| dna polymerase iii subunit theta | F126LOC_RS10870 | Not Available | Negative | 2465322 - 2465519 | 7933.34 |
| ycgn family cysteine cluster protein | F126LOC_RS10875 | Not Available | Negative | 2465758 - 2466204 | 17751.0 |
| fumarylacetoacetate hydrolase family protein | F126LOC_RS10880 | Not Available | Negative | 2466324 - 2466980 | 23841.8 |
| ycgl domain-containing protein | F126LOC_RS10885 | Not Available | Negative | 2467448 - 2467705 | 9717.92 |
| septum site-determining protein minc | F126LOC_RS10890 | Not Available | Positive | 2467842 - 2468528 | 24348.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
