Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeah/yhbh family protein | F126LOC_RS10795 | Not Available | Positive | 2450230 - 2451504 | 49452.2 |
| hemerythrin domain-containing protein | F126LOC_RS10800 | Not Available | Positive | 2451644 - 2452054 | 15970.7 |
| multidrug effflux mfs transporter | F126LOC_RS10805 | Not Available | Positive | 2452244 - 2453443 | 42380.6 |
| d-amino acid dehydrogenase | F126LOC_RS10810 | Not Available | Negative | 2453481 - 2454734 | 46015.3 |
| 6-phosphofructokinase | F126LOC_RS10815 | Not Available | Positive | 2455219 - 2456199 | 35915.7 |
| pts sugar transporter subunit iib | F126LOC_RS10820 | Not Available | Positive | 2456210 - 2456503 | 10748.0 |
| pts sugar transporter subunit iic | F126LOC_RS10825 | Not Available | Positive | 2456517 - 2457854 | 47349.8 |
| hypothetical protein | F126LOC_RS10830 | Not Available | Positive | 2457898 - 2458176 | 10867.9 |
| pts sugar transporter subunit iia | F126LOC_RS10835 | Not Available | Positive | 2458183 - 2458620 | 15966.3 |
| aaa family atpase | F126LOC_RS10840 | Not Available | Positive | 2458617 - 2459150 | 20272.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
