Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F126LOC_RS09750 | Not Available | Positive | 2211145 - 2211606 | 17367.5 |
| tm2 domain-containing protein | F126LOC_RS09755 | Not Available | Positive | 2211877 - 2212176 | 10727.2 |
| alpha/beta hydrolase | F126LOC_RS22335 | Not Available | Negative | 2212259 - 2212360 | 3894.78 |
| glutaredoxin-dependent arsenate reductase | F126LOC_RS09760 | Not Available | Positive | 2212703 - 2213128 | 15976.3 |
| amino acid abc transporter atp-binding protein | F126LOC_RS09765 | Not Available | Negative | 2213163 - 2213987 | 30633.0 |
| amino acid abc transporter permease | F126LOC_RS09770 | Not Available | Negative | 2214012 - 2214956 | 35116.6 |
| gnat family n-acetyltransferase | F126LOC_RS09775 | Not Available | Negative | 2215039 - 2215593 | 20947.0 |
| abc transporter substrate-binding protein | F126LOC_RS09780 | Not Available | Negative | 2215678 - 2216661 | 34831.6 |
| abc transporter substrate-binding protein | F126LOC_RS09785 | Not Available | Negative | 2216729 - 2217658 | 32733.2 |
| llm class flavin-dependent oxidoreductase | F126LOC_RS09790 | Not Available | Negative | 2217681 - 2219009 | 49643.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
