Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iib | F126LOC_RS00175 | Not Available | Positive | 36423 - 36686 | 9502.37 |
| pts cellobiose transporter subunit iic | F126LOC_RS00180 | Not Available | Positive | 36683 - 38005 | 48329.6 |
| glycoside hydrolase family 1 protein | F126LOC_RS00185 | Not Available | Positive | 38031 - 39443 | 54165.7 |
| multiple stress resistance protein bhsa | F126LOC_RS00190 | Not Available | Negative | 39628 - 39885 | 8588.22 |
| duf3748 domain-containing protein | F126LOC_RS00195 | Not Available | Positive | 40122 - 41402 | 46955.9 |
| ycek/yidq family lipoprotein | F126LOC_RS00200 | Not Available | Negative | 41438 - 41794 | 12744.0 |
| small heat shock chaperone ibpa | F126LOC_RS00205 | Not Available | Positive | 42062 - 42475 | 15592.5 |
| small heat shock chaperone ibpb | F126LOC_RS00210 | Not Available | Positive | 42642 - 43094 | 16886.9 |
| putative transporter | F126LOC_RS00215 | Not Available | Positive | 43270 - 44928 | 58843.6 |
| anion permease | F126LOC_RS00220 | Not Available | Positive | 45501 - 46913 | 51178.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
