Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium brasiliense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Cucumis sativus, Nicotiana benthamiana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1209398 bp
Thymine Count
1213087 bp
Guanine Count
1313952 bp
Cytosine Count
1315925 bp
Genome Length
5052362 bp
Protein-coding Genes
4234 genes
Non-Coding Genes
238 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamylcyclotransferase | F126LOC_RS09205 | Not Available | Positive | 2064503 - 2065186 | 25198.2 |
| duf481 domain-containing protein | F126LOC_RS09210 | Not Available | Negative | 2065267 - 2066307 | 38480.9 |
| acyltransferase family protein | F126LOC_RS09215 | Not Available | Negative | 2066610 - 2067887 | 49208.8 |
| two-component system response regulator narl | F126LOC_RS09220 | Not Available | Negative | 2068178 - 2068828 | 23902.2 |
| nitrate/nitrite two-component system sensor histidine kinase narx | F126LOC_RS09225 | Not Available | Negative | 2068821 - 2070629 | 68280.4 |
| nark family nitrate/nitrite mfs transporter | F126LOC_RS09230 | Not Available | Positive | 2070966 - 2072354 | 50042.1 |
| nitrate reductase subunit alpha | F126LOC_RS09235 | Not Available | Positive | 2073068 - 2076829 | 141289.0 |
| nitrate reductase subunit beta | F126LOC_RS09240 | Not Available | Positive | 2076829 - 2078394 | 59385.0 |
| nitrate reductase molybdenum cofactor assembly chaperone | F126LOC_RS09245 | Not Available | Positive | 2078387 - 2079106 | 26730.5 |
| respiratory nitrate reductase subunit gamma | F126LOC_RS09250 | Not Available | Positive | 2079106 - 2079795 | 25741.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft and black rot | Causes | PMC11676143 |
| Blackleg | Causes | PMC11676143 |
| Aerial stem rot | Causes | PMC11676143 |
| Tuber soft rot | Causes | PMC11676143 |
| Soft rot | Causes | PMC13097337 |
| Blackleg | Causes | PMC7824751 |
| Soft rot | Causes | PMC7824751 |
| Soft rot of cucumber | Causes | PMC7824751 |
| Soft-rot | Causes | PMC8270676 |
| Bacterial soft rot | Causes | PMC10673545 |
